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decal()
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DECAL: Differential Expression analysis of Clonal Alterations Local effects
based on Negative Binomial distribution |
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estimate_dispersion()
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Estimate dispersion |
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read_cellranger()
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Load data from cellranger project |
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seq_log()
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Sequence generation in exponential scale |
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sim_decal
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Simulated scRNA-seq count matrix (1500 x 1000) |
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sim_clone() sim_clone_range()
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Simulate a random clonal assignment |
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sim_count() sim_count_from_data()
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Simulate a random UMI count matrix |
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sim_experiment() sim_experiment_from_data()
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Simulate a DECAL perturbation experiment |